Excel · study · 2026
Formation mechanism of agar-like zona pellucida and its adverse effects on human oocytes
Listed in NCBI GEO
Agar-like zona pellucida (ZP) is a type of ZP abnormality that adversely affects oocyte maturation, fertilization, and developmental potential.
Description
However, the mechanisms underlying its formation and its detrimental effects on oocytes remain elusive. Through comprehensive analyses including whole-exome sequencing, transcriptome sequencing, Q-PCR, scanning electron microscopy, and transmission electron microscopy, our study found that the c.2785G>C mutation in ATRX may represent a genetic factor contributing to the agar-like ZP formation.
Moreover, while mutations in ZP1-4 genes were not essential for agar-like ZP formation per se, an increased proportion of ZP1 protein among the four ZP proteins contributed to this phenomenon. Additionally, up-regulation of PMP22 may also be implicated in agar-like ZP formation and exert deleterious effects on oocyte development. Our findings enhance our understanding of agar-like ZP and provide a theoretical foundation for its treatment in assisted reproduction.
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Furthermore, our study demonstrates potential applications in contraception as the agar-like ZP effectively inhibits conventional fertilization of oocytes.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE239nnn/GSE239936 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE239936 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1001502 ncbi.nlm.nih.gov/bioproject/PRJNA1001502 ↗
project · from NCBI GEO
- PubMed 41888319 pubmed.ncbi.nlm.nih.gov/41888319 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens · Other
- From keywords
- Life Sciences
- Inferred from text
- Microscopy 75% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE239936 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:microscopy | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |