Omics · study · 2026
Transcriptome Analysis Reveals the Regulatory Role of Jianpi Huazhi Wan (JPHZW) in Alleviating DSS-Induced Ulcerative Colitis
Listed in NCBI GEO
Description
In order to investigate the therapeutic efficacy and underlying mechanisms of Jianpi Huazhi Wan (JPHZW), a hospital-formulated Traditional Chinese Medicine (TCM), in treating dextran sodium sulfate (DSS)-induced ulcerative colitis (UC) in mice, this study conducted transcriptome sequencing analysis of colon tissue through DSS induced mouse UC model. Key pathways involved in JPHZW’s therapeutic effects included the PPAR pathway (linked to fat metabolism), NF-κB (associated with inflammation), retinol metabolism, and detoxification processes.
JPHZW reduced levels of NF-κB p65, a protein that drives inflammation, while increasing PPARγ, a regulator of metabolic balance. Together, these changes effectively reduced both inflammation and metabolic imbalances in the colon.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE293nnn/GSE293468 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293468 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1244748 ncbi.nlm.nih.gov/bioproject/PRJNA1244748 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE293468 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |