Omics · study · 2026
Crosstalk between NUAK1 and the SETD1A complex regulates glycolysis and gluconeogenesis upon glucose deprivation
Listed in NCBI GEO
Glucose is a crucial energy source for cellular processes and is primarily catabolized into ATP and pyruvate in glycolysis.
Description
Importantly, these metabolites are substrates for chromatin modifications. We previously found that increases in the levels of histone H3T11 phosphorylation (H3pT11) upon limited nutrition changes the profiles of gene expression in yeast.
However, it remains unclear how human cells respond to nutritional stress and whether transcriptional regulation associated with H3T11p contributes to the nutritional stress response in humans. Here, we studied how gene expression was regulated in response to glucose deprivation in human cells. We found that interactions of the NUAK family kinase 1 (NUAK1) with the histone H3K4 methyltransferase, SETD1A, play a critical role in response to glucose starvation by controlling the expression of metabolic enzymes, including Hexokinase 2 and phosphoenolpyruvate carboxykinase 2.
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Remarkably, the levels of H3T11p and H3K4me3 at these gene loci were increased upon glucose starvation. Thus, our data suggested that the interactions of NUAK1 with the SETD1A complex mediate the crosstalk between H3K4me3 and H3T11p in response to glucose starvation in humans.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE313nnn/GSE313047 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313047 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1378183 ncbi.nlm.nih.gov/bioproject/PRJNA1378183 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 74%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE313047 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.0.0 | title+keywords+description (74%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |