Omics · study · 2026
ZNF467 nucleoplasmic condensates enhance human haematopoietic stem cell homing
Listed in NCBI GEO
Human hematopoietic stem cells (HSCs) possess a distinct gene expression profile distinguishing them from progenitor cells.
Description
Gaining insight into the distinctive features of these signature genes could accelerate the development of effective strategies to enhance the clinical efficacy of HSC transplantation. Research into genes specifically enriched in cord blood (CB) HSCs revealed high expression levels of ZNF467 in both freshly isolated human CB HSCs and ex-vivo cultured CB HSCs.
ZNF467, originally identified from a mouse hematogenic endothelial cell line, has been linked to the regulation of adipogenesis and osteogenesis within the mouse bone marrow. However, its biological function in human tissues remains largely elusive. Although neither overexpression nor knockdown of full-length ZNF467 had dramatic effect on ex-vivo expansion of CB HSPCs,nucleoplasmic condensates of truncated ZNF467, resulting from ZNF467 with the amino acids (216-292)deletion,as npZNF467.Overexpression npZNF467 profoundly enhances the long-term reconstituting capacity of human cord blood HSCs.Overexpression of npZNF467 in HSC and progenitor cells induces a unique gene expression profile, notably upregulating genes associated with HSPC migration and adhesion.
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The npZNF467 condensates significantly amplify the homing efficiency of CB HSPCs, primarily through activating expression of MMP9 and ICAM1.Collectively,the enforced expression of npZNF467 condensate initiates a homing-related gene expression program, fostering both homing and long-term engraftment of human CB HSPCs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE267nnn/GSE267698 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE267698 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1112423 ncbi.nlm.nih.gov/bioproject/PRJNA1112423 ↗
project · from NCBI GEO
- PubMed 41671478 pubmed.ncbi.nlm.nih.gov/41671478 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Genetics 69%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE267698 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |