Omics · study · 2026
Single cell RNA sequencing analysis using embryonic day 7.5, 8.5, 10.5, 11.5 and 12.5 placenta from mice
Listed in NCBI GEO
The placenta establishes a maternal–fetal exchange interface which ensures transportation of nutrients and gases between the mother and the fetus.
Description
However, the intricate molecular processes and gene expression dynamics in trophoblast progenitors and in matured trophoblast cells are incopletely understood. Therefor, in this study we performed gene expression analyses during the course of mouse placenta development.
We performed single cell RNA-sequencing analyses with mouse placenta primordium at embryonic day 7.0 and subsequently at embryonic days 8.5-embryonic day 12.5 to capture gene expression dynamics in trophoblast stem/progenitor compartment as well as in matutered trophoblast cells and other cell types in the placenta.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE278nnn/GSE278039 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278039 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1165266 ncbi.nlm.nih.gov/bioproject/PRJNA1165266 ↗
project · from NCBI GEO
- PubMed 42431891 pubmed.ncbi.nlm.nih.gov/42431891 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 70% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE278039 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |