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Omics · study · 2026

The RNA-binding protein PTBP3 regulates alternative polyadenylation in naïve B cells

Listed in NCBI GEO

As an important family of RNA-binding proteins, PTB family plays crucial roles in post-transcriptional regulation of gene expression.

Description

PTBP1 and PTBP2 have been extensively characterized as important splicing factors regulating many biological processes. PTBP3 is reported to be essential for AID-targeting specificity in activated B cells.

However, the physiological roles and regulatory mechanisms of PTBP3 in naive B cells are largely unknown. Here, we identified PTBP3 as a regulator of alternative polyadenylation using 2P-seq data in naive B cells. We revealed that PTBP3 promoted poly(A) signal recognition through binding to CU-rich elements in 3’ UTR and interacting with CPSF6 factor in a position- and dosage-dependent manner.

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Furthermore, we also demonstrated that PTBP3 could regulate mRNA stability by facilitating the usage of different poly(A) sites in mRNA. Our study will provide novel insights into the PTBP3 functions in innate immunity and immunological diseases.

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Life Sciences
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Genetics 70%
Provenance · 1 source records, 8 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE14889913 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].anzsrc:group:3105enrichment · NCBI GEOtaxonomy-embedding@1.1.0title+keywords+description (70%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title