Omics · study · 2026
Activity-dependent expression of Fezf2 regulates inhibitory synapse formation
Listed in NCBI GEO
The function of the cerebral cortex depends on the proper balance of excitation and inhibition within the cortical circuit.
Description
The amount of inhibition a given neuron receives is dependent on its neuronal type. Additionally, neurons can regulate the amount of inhibition they receive through activity-dependent regulation of gene expression.
We use bulk sequencing of ribosome-associated RNA to show that selector gene Fezf2, which determines the specification of Layer 5 extratelencephalic (ET) projection neurons in utero, is regulated by neuronal activity. Postnatal reduction of Fezf2 expression decreases perisomatic inhibition originating from PV+ basket cells onto ET projection neurons, without affecting other hallmarks of ET neuron identity. We identify the type II Cadherin Cdh22 as a putative effector gene that is regulated both by FEZF2 and by neuronal activity, and removal of which decreases perisomatic inhibition.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE247nnn/GSE247075 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE247075 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1036187 ncbi.nlm.nih.gov/bioproject/PRJNA1036187 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE247075 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |