Omics · study · 2026
Effect of maternal social isolation rearing (SIR) on adult offspring gene expression in the thalamus
Listed in NCBI GEO
Antenatal depression affects 10–20 % of pregnancies worldwide and contributes to maternal morbidity, pre-term birth, and long-term neuropsychiatric vulnerability in children.
Description
Yet the neural circuits and molecular programs through which maternal mood disturbance shapes offspring brain development are poorly defined. Depression that predates conception and continues through pregnancy confers enduring vulnerability to mood and cognitive disorders in offspring, yet its neuroanatomical and molecular footprints remain elusive.
To address this knowledge gap, we employed a model of prenatal depression based on social isolation rearing in female mice that induces a depressive-like phenotype before conception that persists during pregnancy. Female C57BL/6 N mice were subjected to social-isolation rearing (SIR) from weaning through gestation and lactation. Adult offspring underwent standard anxiety testing and thalamic bulk RNA sequencing.
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SIR offspring of both sexes exhibited pronounced anxiety in light–dark, open-field, Y-maze and novelty-suppressed-feeding assays. RNA sequencing uncovered extensive, sex-divergent transcriptional re-programming: males were enriched for pathways governing protein synthesis and synaptic organisation, whereas females showed signatures associated with neuronal plasticity and glial development.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE304nnn/GSE304847 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE304847 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1303048 ncbi.nlm.nih.gov/bioproject/PRJNA1303048 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Zoology 68%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE304847 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3109 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (68%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |