Omics · study · 2026
Comprehensive transcriptomic profiles of human induced pluripotent stem cells or human embryonic stem cells exposed to bisphenol A or thalidomide
Listed in NCBI GEO
In this study, we examined the epigenetic toxicity of bisphenol A and thalidomide, focusing on their effects on cellular differentiation and gene expression.
Description
Thalidomide promoted ectodermal differentiation at the expense of other lineages, while bisphenol A had milder effects. Transcriptome analysis revealed distinct gene expression changes for each chemical, with thalidomide inducing more pronounced shifts.
These changes correlated with increased H3K27ac modifications at enhancer regions of upregulated genes, linking gene expression alterations to epigenetic modifications. The findings emphasize the role of epigenetic mechanisms in developmental toxicity.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE279nnn/GSE279680 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE279680 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1174081 ncbi.nlm.nih.gov/bioproject/PRJNA1174081 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE279680 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |