Omics · study · 2026
Synthetically engineered probiotic suppresses colorectal cancer via inhibition of Wnt/β-catenin signaling
Listed in NCBI GEO
Colorectal cancer (CRC) is one of the most prevalent malignancies globally, with particularly concerning epidemiological increasing incidence in younger populations.
Description
Recent breakthrough of synthetic biology stimulates the utilization of engineered bacteria for cancer diagnosis and treatment. To achieve the early CRC diagnosis, we performed a comprehensive fecal metabolomic analysis in CRC mice models and patients, and identified ornithine as a specific metabolic biomarker for tumor development.
We subsequently engineered an E. coli Nissle 1917 (EcN)-based bioluminescent (Rluc8) reporter system capable of ornithine-responsive tumor detection. For therapeutic intervention, we constructed a probiotic system that locally releases Dickkopf 3 (DKK3), a potent Wnt signaling antagonist to retard tumor growth. Oral administration of the bacteria demonstrated reduced tumor burden, improved survival outcomes in multiple preclinical models, and the anticancer efficacy was further confirmed in CRC patient-derived organoids.
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Taken together, we developed a novel probiotic platform combing non-invasive diagnostic capability with targeted therapeutic delivery for CRC management, underscoring strong potential for clinical translation and eventual application in preventive oncology.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE307nnn/GSE307572 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307572 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1322315 ncbi.nlm.nih.gov/bioproject/PRJNA1322315 ↗
project · from NCBI GEO
- PubMed 42612617 pubmed.ncbi.nlm.nih.gov/42612617 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69% · Cancer 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE307572 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |