Excel · study · 2026
Effect of lentivirus pseudotyped by SARS-CoV2 S-protein on 3D skin equivalents transcriptome
Listed in NCBI GEO
Cell entry of SARS-CoV-2 depends on binding of the viral spike (S) glycoprotein to the host cell receptor ACE2 and its priming/cleavage by the host protease TMPRSS2.
Description
We and others showed that skin cells including keratinocytes express significant amounts of ACE2 and TMPRSS2. To uncover the potential role of skin in SARS-CoV-2 infection we infected 3D skin equivalents (HSE) made from human keratinocytes growing on collagen matrix infused with fibroblasts with lentiviral reporter pseudotyped by SARS-CoV-2 S-protein and expressing Tomato fluorescent protein.
Tomato expression analysis by Q-PCR and immunofluorescence indicated that HSE were successfully infected. Here we analyzed the effect of binding of viral S-protein to ACE2 in control and inflamed by the cytokines (IL1b, IL6, TNFa and IFNg) 3D HSE on keratinocyte transcriptome.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE304nnn/GSE304119 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE304119 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1298942 ncbi.nlm.nih.gov/bioproject/PRJNA1298942 ↗
project · from NCBI GEO
- PubMed 42353101 pubmed.ncbi.nlm.nih.gov/42353101 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE304119 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |