Omics · study · 2026
The function of FTO in small cell lung cancer [RNA-seq]
Listed in NCBI GEO
This study investigates the role of the fat mass and obesity-associated protein (FTO), an m6A RNA demethylase, in small cell lung cancer (SCLC).
Description
RNA sequencing was performed to evaluate the transcriptomic changes in SCLC cell lines H69 and H82 following treatment with two selective FTO inhibitors, CS2 and FB23-2. Cells were treated with the inhibitors under defined conditions, and total RNA was extracted using the TRIzol reagent.
RNA-seq libraries were constructed and sequenced using the DNBSEQ-T7 platform. The resulting dataset provides valuable insight into the downstream molecular effects of FTO inhibition in SCLC and may contribute to the identification of potential therapeutic targets in this highly aggressive tumor type.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE300nnn/GSE300624 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE300624 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1281577 ncbi.nlm.nih.gov/bioproject/PRJNA1281577 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE300624 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |