Data · study · 2026
RIP-seq analysis of RNA-binding protein in gastric cancer cells
Listed in NCBI GEO
HNRNPF is an important RNA-binding protein.
Description
To investigate its role in gastric cancer cells, RIP-seq was performed to identify RNAs interacting with HNRNPF. RNA–protein complexes were immunoprecipitated using an anti-HNRNPF antibody, followed by RNA purification and high-throughput sequencing.
This study aims to uncover how HNRNPF interacts with and regulates downstream RNAs in gastric cancer cells.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE303nnn/GSE303348 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303348 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1294883 ncbi.nlm.nih.gov/bioproject/PRJNA1294883 ↗
project · from NCBI GEO
- PubMed 42003918 pubmed.ncbi.nlm.nih.gov/42003918 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Other
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE303348 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |