Simulated metagenomes for Mixed <i>E. coli</i> Benchmarking study

These metagenomes make up three different datasets of ST+Serotype, Antibiotic Resistance Gene (ARG) and Virulence Gene (VG) where the ST+Serotype dataset has 60 simulated metagenomes while the other two have 10 each.

Metadata indicating the dominant MLST according to the Achtman-7 scheme and Serotype in the simulated metagenomes and their proportions can be found in <b>metadata.xlsx</b>. The genes present in each of the 10 simulated metagenomes belonging to the datasets of ARG and VG can also be found in the metadata. </li><li>The subfolder <b>longreads</b> contains 10 long-read metagenomes simulated at 15000bp using Badread with its pacbio2016 error model.</li></ol><p dir="ltr">All results from these simulation experiments and figures can be found at the associated GitHub of <a href="github.com/dibsondivya/MixEcoliBench" target="_blank" rel="noreferrer">github.com/dibsondivya/MixEcoliBench</a> under the MIT License.