Excel · study · 2026
Repertoire FLEX (REFLEX) Enables High-Throughput Multiomic scRNAseq with AIR Detection
Listed in NCBI GEO
Profiling the vast diversity of the T-cell repertoire at single-cell resolution is challenging due to the scale and cost requirements involved.
Description
Current technologies capture TCR or perform single-cell sequencing at scale but struggle to combine both. Here, we utilize both neat and virally stimulated PBMCs to showcase “REFLEX”, a technological approach enabling highly scalable, low cost-per-cell profiling of TCR repertoire in parallel with epitope and gene expression.
This combination of capabilities allows for high throughput, multi-omic profiling of rare T cell subsets and longitudinal study formats at scales that were previously unattainable.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE314nnn/GSE314863 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314863 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1377320 ncbi.nlm.nih.gov/bioproject/PRJNA1377320 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Longitudinal study 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE314863 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].local:method:longitudinal-study | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |