Omics · study · 2026
Hypoxia differentially affects coronary vessel formation during heart development
Listed in NCBI GEO
The coronary vessel system is a dense and diverse network of arteries, veins and capillaries formed by endothelial cells from a variety of sources.
Description
While hypoxia is a known stimulus for angiogenic sprouting, the exact mechanisms by which hypoxia - and resultant increased VEGFA - influences vessel growth in the heart are not clearly delineated. We used a genetic mouse model to mimic hypoxia through ectopic stabilisation of myocardial HIFα.
This enabled us to study the consequences of hypoxia without vascular depletion. Changes in coronary ECs in these hearts relative to littermate controls were assessed by single cell RNA-sequencing. This identified increased angiogenic gene expression and a shift towards a non-proliferative, migratory tip cell phenotype.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE292nnn/GSE292395 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE292395 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1238307 ncbi.nlm.nih.gov/bioproject/PRJNA1238307 ↗
project · from NCBI GEO
- PubMed 42252105 pubmed.ncbi.nlm.nih.gov/42252105 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Heart 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE292395 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |