Omics · study · 2026
GDP-Driven purine metabolic rewiring promotes Th17-like polarization of CD4⁺ T cells and reveals a RANBP1-associated nucleo-metabolic program
Listed in NCBI GEO
Th17 cell fate is shaped by cytokines, transcriptional regulators and metabolic cues, yet the contribution of extracellular guanine nucleotides to CD4⁺ T-cell polarization remains poorly defined.
Description
Here, we asked whether extracellular GDP acts as an instructive purine signal and whether RANBP1, a regulator of Ran-GTP hydrolysis and nucleo-cytoplasmic trafficking, mediates the GDP-dependent phenotype. In primary human CD4⁺ T and Th17 cells, we integrated Raman imaging, RNA-seq, proteomics, purine metabolomics, Seahorse bioenergetics, lactate assays, flow cytometry, western blotting and RANBP1 perturbation.
GDP stimulation induced a coordinated nucleo-metabolic program rather than nonspecific activation. In CD4⁺ T cells, GDP remodeled nuclear biochemical composition, altered purine pools, enriched mitochondrial membrane and nucleotide-transporter pathways, and promoted a Th17-like signature marked by IL-23R, RORγt and IL-17A. Integrated RNA-seq/proteomic analysis revealed convergence on mitochondrial ATP/ADP transport, purine handling and immune differentiation, while western blotting showed modulation of PNP, LDHA and MCT1 together with lysine and histone-associated acetylation signals.
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In committed Th17 cells, GDP amplified central carbon metabolism, pyruvate-to-acetyl-CoA conversion, branched-chain amino acid degradation and DNA replication/repair, while reshaping inflammatory plasticity. RANBP1 overexpression faithfully reproduced key GDP-associated bioenergetic and Th17-like features, whereas RANBP1 silencing restrained metabolic fitness and allowed GDP to rescue a bioenergetic pattern reminiscent of GDP-treated naïve CD4⁺ cells.
Exploratory pediatric B-ALL RNA-seq showed that purine, lactate/glucose, mitochondrial and nuclear-transport modules remained traceable during therapy. Together, purinergic signaling emerges as a microenvironmental and intracellular controller of T-cell fate. These findings position RANBP1 as a pivotal intracellular transducer linking extracellular GDP to metabolic rewiring and Th17-like polarization.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE337nnn/GSE337240 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337240 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1484533 ncbi.nlm.nih.gov/bioproject/PRJNA1484533 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 71% · Imaging 75% · Mass spectrometry 65% · RNA sequencing 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE337240 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:imaging | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:mass-spectrometry | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |