Omics · study · 2026
Cell culture effects on isolated fibrotic lung CD103+ DCs
Listed in NCBI GEO
The trypophan metabolite kynurenine is a well known AHR ligand and drives inflammatory AHR respones, especially in dendritic cels.
Description
Ex vivo studies of dendrtic cells are complicated by the fact that culture conditions do not reproduce complex tissue microenvironments. To study these effects we compared transcriptomes of CD103+ lung DCs isolated from mice with blm-induced fibrosis and compared with DCs that had been cultured in standard culture media for 18h.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE338nnn/GSE338791 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338791 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1495891 ncbi.nlm.nih.gov/bioproject/PRJNA1495891 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE338791 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |