Omics · study · 2026
Transcriptome analysis of effects of TPH1 in prostate cancer cell lines
Listed in NCBI GEO
Tryptophan hydroxylase 1 (TPH1), the rate-limiting enzyme in peripheral serotonin biosynthesis, has emerged as a critical driver of neuroendocrine prostate cancer (NEPC) progression.
Description
Elevated TPH1 expression is observed in NEPC cell lines and patient tumor samples. To elucidate the role of TPH1 in prostate cancer development and progression, we performed RNA sequencing (RNA-seq) in prostate cancer cells with either TPH1 knockdown or overexpression, compared to respective control cells.
Differential gene expression analysis and subsequent pathway enrichment revealed key molecular programs regulated by TPH1. Functionally, TPH1 overexpression promotes tumor cell proliferation and the acquisition of neuroendocrine features, while genetic or pharmacological inhibition of TPH1 suppresses NEPC cell growth and neuroendocrine marker expression. These findings underscore the oncogenic role of TPH1 in NEPC and support its potential as a therapeutic target.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE302nnn/GSE302430 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302430 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1290919 ncbi.nlm.nih.gov/bioproject/PRJNA1290919 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 70% · Cancer 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE302430 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (70%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |