Omics · study · 2026
Methyglyoxal reshapes the transcriptional network of human retinal endothelial cells [RNA-seq]
Listed in NCBI GEO
Diabetic retinopathy (DR) is a complex microvascular complication of diabetes and a leading cause of vision impairment.
Description
A primary event of DR is the functional impairment of microvascular cells (i.e., pericytes and endothelial cells) and pathological changes in the retinal neurovascular unit. In diabetes-related complications, advanced glycation end products (AGEs) play a pivotal role in oxidative damage induced by chronic hyperglycemia particularly in damaging retinal endothelial cells.
Methylglyoxal (MGO) is the most reactive AGE precursor, able to induce vascular damage, neuroretinal dysfunction and retinal lesions. Here, we demonstrate that sublethal doses of MGO induce protein glycation adduct formation in human retinal endothelial cells (hRECs), impairing the migratory and tube-forming capabilities. Moreover, transcriptome and miRNome analyses highlighted extensive perturbations in gene expression and microRNA profiles, especially related to gene expression regulation, cell cycle, cell death and vasculature development.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE263nnn/GSE263471 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263471 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1097600 ncbi.nlm.nih.gov/bioproject/PRJNA1097600 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE263471 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |