Table · dataset · 2026
Draft genome assembly and annotation of coccoid green algae <i>Micractinium simplicissimum</i> from Antarctica
Listed in HKU DataHub and figshare and Loughborough Research Repository — shown once because both records carry DOI 10.6084/m9.figshare.32685531.v2
<p dir="ltr"><i>Micractinium simplicissimum</i> is a coccoid green microalga first described from Antarctic freshwater habitats, with additional records from Russia.
Description
Despite the industrial potential of the genus <i>Micractinium</i>, genomic resources within the genus remain limited, and no nuclear genome has been reported for this species to date. Therefore, this study the first to present its <i>de novo</i> nuclear genome assembly.
Here, we sequenced and assembled the genome and transcriptome of <i>M. simplicissimum</i> strain KSF0100 from Antarctica using Oxford Nanopore long reads, Illumina short reads, and RNA-seq data, and performed structural and functional gene annotation.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.32685531.v2 ↗
DOI / persistent id · from datahub hku hk
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from datahub hku hk
Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Chemistry · Computer Science & AI · Computer Science & AI · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Economics & Finance · Economics & Finance · Engineering · Engineering · Genomics and transcriptomics · Genomics and transcriptomics · Genomics and transcriptomics · Humanities · Humanities · Life Sciences · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Medicine & Health · Medicine & Health · Ocean & Atmospheric Science · Psychology & Behavioral Science · Sequence analysis · Sequence analysis · Sequence analysis · Social Science · Social Science
- Inferred from text
- RNA sequencing 65%
Provenance · 3 source records, 37 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| HKU DataHub | oai:figshare.com:article/32685531 | 11 d ago | JSON v1 |
| figshare | oai:figshare.com:article/32685531 | 11 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/32685531 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].anzsrc:field:310204 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Genomics and transcriptomics'] |
| concepts[field].anzsrc:field:310204 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Genomics and transcriptomics'] |
| concepts[field].anzsrc:field:310204 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Genomics and transcriptomics'] |
| concepts[field].anzsrc:field:310206 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Sequence analysis'] |
| concepts[field].anzsrc:field:310206 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Sequence analysis'] |
| concepts[field].anzsrc:field:310206 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Sequence analysis'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · datahub hku hk | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/description |
| license | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/rights |
| publication_date | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| title | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/title |