119 datasets

NCL Data2026 · dataset

<p dir="ltr">SLO: Datoteka vsebuje programsko kodo za okolje RStudio, ki smo jo uporabili za pripravo in obdelavo podatkov v sklopu doktorske naloge. Kode vključujejo pripravo vhodnih datotek za analizo z orodjem GAPIT, združevanje rezultatov različnih analiz ter generiranje grafičnih prikazov Manhattan plot za vizualizacijo genomske asociacijske študije.</p><table><tr><td><p dir="ltr">EN: This fi

NCL Data2026 · dataset

<p dir="ltr">The Ankole is a long-horned Sanga cattle breed (Bos taurus africanus) native to Uganda and widely distributed across sub-Saharan Africa and beyond. It is valued for disease and parasite tolerance, adaptation to the equatorial environment and its unique cultural significance. This data relates to the generation and annotation of a haplotype-resolved, chromosome-level genome assembly us

NCL Data2026 · dataset

<p dir="ltr">SLO: Datoteka vsebuje sezname genov, anotiranih na genomu Apollo (ločeno za haplotipa P1 in P2), ki se nahajajo v območju ± 50 kbp okoli izbranih SNP-jev. Vključeni so rezultati funkcionalne anotacije, pridobljeni z orodjema BLAST in Blast2GO, ki obsegajo opise zaporedij, ontologijo genov (GO), encimske kode ter domene InterProScan</p><table><tr><td><p dir="ltr">EN: This file provides

NCL Data2026 · dataset

<p dir="ltr">SLO: Datoteka vsebuje Bash skripte, ki smo jih razvili za bioinformatsko obdelavo podatkov v okviru doktorske naloge. Skripte so pripravljene za mapiranje zaporedij na haplotip 1, pri čemer smo identičen postopek izvedli tudi za haplotip 2. Celoten proces vključuje poravnavo na referenčni genom in pridobivanje datotek VCF z zaznanimi genetskimi različicami.</p><table><tr><td><p dir="l

NCL Data2026 · dataset

<p dir="ltr">SLO: Datoteka vsebuje programsko kodo za okolje RStudio, ki smo jo pripravili za izvedbo analize naključnih gozdov (Random Forest) z uporabo paketa ranger. Koda vključuje postopke za poganjanje analize, izdelavo končnih izračunov statističnih parametrov ter vizualizacijo rezultatov, ki smo jih uporabili v okviru doktorske naloge.</p><table><tr><td><p dir="ltr">EN: This file contains R

figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">This dataset provides the processed data supporting the manuscript"LCP modulates hepatic gluconeogenesis and gut microbiota in juvenileMicropterus salmoides (largemouth bass)" (submitted to the EgyptianJournal of Aquatic Research). It contains eight summary tablesextracted from the doctoral dissertation (Fan, UMS 2026) and, fromVersion 2, four full-resolution matrices generated direct

figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">High-grade serous ovarian carcinoma (HGSOC) is the most lethal form of gynaecological cancer, with patient outcomes influenced by both tumour-intrinsic biology and the surrounding tumour microenvironment. Bulk transcriptomic approaches capture these features as a composite signal, limiting the ability to resolve their cellular and spatial origins. We therefore used <b>Xenium spatial t

figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">The original data used for training the DEPICT model and the test datasets used for model inference to reproduce the results presented in the manuscript are provided here.</p>

figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">Anntation information of majus genome from http://bioinfo.cemps.ac.cn/Am/download_v3.php</p>

Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Crystal structure

<p dir="ltr">mRNA sequencing</p><p dir="ltr"><br></p>

ZivaHub + Deakin Research Online + DMU Figshare2026 · dataset

<p dir="ltr">It's the list of exons in builld 37. This file is required to create the chanjo database</p>

HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">Pseudobulk genome-wide transcription from whole adult mouse lung. Three groups: healthy (no treatment), 4wkHDM (after 4 weeks of intranasal house dust mite exposure), and 6wkHDM (after 6 weeks of intranasal house dust mite exposure).</p>

ZivaHub + Deakin Research Online + DMU Figshare2026 · dataset

<p dir="ltr">Yerba mate is a significant crop for culture and industries across southern South America. However, increasing environmental challenges currently threaten its productivity, ecological stability, and socioeconomic role. We, therefore, focused on broadly characterize the LRR-RLK genes in yerba mate predicting their potential roles in development, growth, and stress response, providing a

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<h4 dir="ltr">This repository hosts the structural and functional genome annotations, non-redundant predicted coding sequences, translated proteomes, and non-coding RNA annotations supporting the chromosome-level reference genome assemblies of two red algae: <i>Porphyra dioica</i> (BioProject PRJEB104629) and <i>Porphyra linearis</i> (BioProject PRJEB104630) (Bangiales).</h4><h4 dir="ltr">This dat

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">This dataset contains consensus cNMF usage for 1,036,039 human cortical nuclei and spatial program scores for 5,659,097 bins from 44 sections across 14 cortical areas.</p><p><br></p>

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">Metadata of Klebsiella pneumoniae genomes used in the study.</p>

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">This dataset contains KEGG pathway enrichment analysis results derived from differentially expressed genes (DEGs) identified in RNA-seq datasets from multiple microalgal species.<br>KEGG enrichment analyses were performed separately for up- and down-regulated gene sets for each species and experimental comparison.</p><p dir="ltr">Each file includes enriched KEGG pathways with associat

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr"> The workbook reports the 186 significant local splicing variation events identified in 167 genes across <i>Chlorella ohadii, Skeletonema marinoi,</i> and <i>Tetradesmus obliquus</i>. For each event, species, experimental comparison, gene and LSV identifiers, functional annotation, splicing-event type, maximum |ΔPSI|, probability of change, genomic location, functional tier and catego

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · Astronomical catalogue

<h3 dir="ltr"><b>Description</b></h3><p dir="ltr">Here we provide additional supplementary materials for the article, entitled "<i>Oysters from five continents harbour a vast array of previously unknown RNA viruses, including many putative viruses of vertebrat</i><i>e</i>" (********).</p><p><br></p><h3 dir="ltr"><b>References</b></h3><ol><li>Zhong KX, Chan AM, and Suttle CA. (2026) Oysters from fi

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">The workbook contains all significant GO terms and KEGG pathways identified separately for each species, experimental comparison, and regulation direction, together with their enrichment statistics and assignment of contributing genes to the T1–T3 functional tiers. Additional sheets summarise the overall tier composition of GO and KEGG enrichment, the gene-level overlap between the tw

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">This dataset contains Gene Ontology (GO) enrichment analysis results derived from differentially expressed genes (DEGs) identified in RNA-seq datasets from five microalgal species: <i>Chlorella ohadii, Coccomyxa subellipsoidea, Seminavis robusta, Skeletonema marinoi</i>, and <i>Thalassiosira pseudonana</i>.<br>GO enrichment analyses were performed separately for up- and down-regulated

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">The workbook reports network parameters for Thalassiosira pseudonana, Seminavis robusta, and Tetradesmus obliquus; module-level statistics for all detected modules and the subset classified as key modules; module–trait correlations and permutation-based eigengene tests; annotated tier-specific hub genes with module membership (kME) values; and the cross-species recurrence of CO₂-relat

ZivaHub + Deakin Research Online + DMU Figshare + HKU DataHub + Swinburne Figshare + DaYta Ya Rona + SUNScholarData + figshare + Loughborough Research Repository + GRANTS Data + UP Research Data Repository2026 · RNA sequencing

<p dir="ltr">Gene-level information is reported for the 22 up- and down-regulated DEG lists, including species, BioProject, experimental comparison, regulation direction, gene identifier, functional annotation, log₂ fold change, adjusted p-value, functional tier (T1–T3), and assigned functional category.</p>

ZivaHub + HKU DataHub + DaYta Ya Rona + figshare + Loughborough Research Repository + UP Research Data Repository2026 · Astronomical catalogue

<p dir="ltr">Raw counts matrix for gene x sample dataset and sample metadata</p>

ZivaHub2026 · dataset

<p dir="ltr">Soft Rot Pectobacteriaceae (SRP), comprising the genera Dickeya and Pectobacterium, are Gram-negative plant pathogens responsible for economically significant diseases such as soft rot and blackleg in potatoes. In South Africa, Pectobacterium brasiliense is the primary causal agent, while in parts of Europe, including France, Dickeya dadantii<i> </i>is particularly impactful. With no