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Data · dataset · 2026

Gene expression and functional enrichment data from RNA-seq and public databases on autophagy and ABA responses during Arabidopsis thaliana seed germination

Listed in e-cienciaDatos

This dataset contains the supplementary data associated with the article “Autophagy-related genes AtATG5 and AtATG7 influence reserve mobilization and ABA responses during Arabidopsis seed germination”, published in the Journal of Experimental Botany.

Description

It includes: (i) a list of genes identified using the autophagy Gene Ontology term in AmiGO and their expression profiles in siliques and seeds obtained from the Bio-Analytic Resource for Plant Biology (BAR); (ii) DESeq2 differential expression results for atg7 versus Col-0 imbibed seeds at t0; (iii) Gene Set Enrichment Analysis (GSEA) results for the same comparison; (iv) DESeq2 differential expression results for atg7 versus Col-0 seeds at t50 in response to 1 µM ABA, including genes specifically responding to ABA in the atg7 mutant compared with Col-0; and (v) Gene Ontology and transcription factor analyses of the ABA response in atg7 versus Col-0 during seed germination.

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Where it is published

Catalogue records · 1

Topics

From keywords
Medicine & Health
Inferred from text
Oncology and carcinogenesis 68% · RNA sequencing 65%
Provenance · 1 source records, 11 field assertions
SourceKeyLast seenRaw
e-cienciaDatosdoi:10.21950/FF3GXQ6 d agoJSON v1
FieldAssertionExtractorEvidence
concepts[field].anzsrc:group:3211enrichment · edatos consorciomadrono estaxonomy-embedding@1.1.0title+keywords+description (68%)
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concepts[field].dataverse_subject:ciencias-m-dicas-de-la-salud-y-de-la-vidasource · edatos consorciomadrono esconnector:edatos_consorciomadrono_es@1.0.0/subjects
concepts[field].local:field:medicine-healthmapping · edatos consorciomadrono esconnector:edatos_consorciomadrono_es@1.0.0/subjects
concepts[modality].local:modality:rna-seqenrichment · edatos consorciomadrono eskeyword-concept-rules@1.0.0title+description (65%)
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