Omics · study · 2026
Ascl1 Promotes Rod Photoreceptor Differentiation and Represses Müller Glial and Bipolar Cell Differentiation from Late-Stage Retinal Progenitor Cells [ATAC-seq]
Listed in NCBI GEO
Ascl1, a prototypical proneuronal basic helix-loop-helix (bHLH) transcription factor, has been shown to exhibit intriguing capacity for regenerating retinal neurons by reprogramming Müller glial cells.
Description
However, the regenerative outcome remains far from ideal, and the underlying mechanisms remain elusive. As the last cell type generated by late-stage retinal progenitor cells (RPCs), Müller glial cells share greater similarity with late RPCs—at both the transcriptional and epigenetic levels—than any other retinal cell type.
In this study, we employed late RPCs as a model system to investigate how Ascl1 overexpression reprograms the retinogenic competence of late RPCs, and to explore the associated transcriptional and epigenetic mechanisms.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE311nnn/GSE311769 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311769 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1370887 ncbi.nlm.nih.gov/bioproject/PRJNA1370887 ↗
project · from NCBI GEO
- PubMed 42606189 pubmed.ncbi.nlm.nih.gov/42606189 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE311769 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |