Data · dataset · 2026
Raw scRNA-seq FASTQ data files for: Nerve growth factor responsive elements modulate immune cell inflammation and are dysregulated in an Alzheimer's disease mouse model
Listed in Researchdata.se
This dataset contains raw single-cell RNA sequencing (scRNA-seq) FASTQ files generated from splenocytes isolated from wild-type C57BL/6J mice (n = 2).
Description
Libraries were prepared using the 10x Genomics Chromium Next GEM Single Cell 3′ Reagent Kit v3.1 and sequenced on an Illumina NextSeq 2000 platform. The dataset consists of paired-end raw sequencing files associated with a study titled "Nerve growth factor responsive elements modulate immune cell inflammation and are dysregulated in an Alzheimer's disease mouse model".
The dataset consists of four (4) files: - RGAD_WT_S1_L001_R1_001.fastq.gz Forward reads for WT sample 1 - RGAD_WT_S1_L001_R2_001.fastq.gz Reverse reads for WT sample 1 - RGAD_WT1_S1_L001_R1_001.fastq.gz Forward reads for WT sample 2 - RGAD_WT1_S1_L001_R2_001.fastq.gz Reverse reads for WT sample 2
Links
Where it is published
- DOI doi.org/10.48723/d5mw-0122 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Immunology · Medicine & Health
- Inferred from text
- Disease 75% · RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:2026-128/1 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |