Omics · study · 2026
Bulk RNA-sequencing of normal and Gls1 KO alveolar epithelial cells in mouse
Listed in NCBI GEO
Impaired alveolar regeneration underlies numerous chronic lung diseases, yet the metabolic determinants governing this process remain poorly understood.
Description
Effective alveolar repair depends on the differentiation of type 2 alveolar epithelial cells (AT2), the resident lung stem/progenitor cells, into type 1 alveolar epithelial cells (AT1) to restore gas exchange surfaces. Here, we reveal that glutaminolysis mediated by glutaminase 1 (GLS1) orchestrates a metabolic checkpoint essential for AT2 stem/progenitor cell differentiation.
Using primary AT2 cells, alveolar organoids, and lineage-tracing mouse models, we demonstrate that GLS1 expression is upregulated during AT2-to-AT1 differentiation and is essential for this process. The differentiation program is accompanied by metabolic reprogramming characterized by increased glycolysis and enhanced glutamine flux into the TCA cycle. AT2-specific GLS1 deletion severely impairs differentiation both in vitro and in vivo, leading to defective alveolar repair and exacerbated pulmonary fibrosis following bleomycin injury.
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Mechanistically, GLS1 deletion triggers excessive autophagy and subsequent degradation of the Hippo pathway effectors YAP and TAZ, key transcriptional regulators governing progenitor cell fate decisions. Pharmacological inhibition of autophagy with chloroquine restores YAP/TAZ protein levels, rescues AT2-to-AT1 differentiation, and attenuates fibrosis while improving lung function. Consistent with our experimental findings, AT2 cells from patients with idiopathic pulmonary fibrosis exhibit reduced GLS expression, suggesting clinical relevance.
These findings establish a previously unrecognized regulatory axis linking glutamine metabolism to alveolar stem/progenitor cell fate decisions and identify autophagy modulation as a potential therapeutic strategy for enhancing lung regeneration in fibrotic diseases.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE310nnn/GSE310645 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310645 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1366817 ncbi.nlm.nih.gov/bioproject/PRJNA1366817 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE310645 | 7 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |