Omics · study · 2026
Tubulin autoregulation mediator TTC5 regulates neuronal morphology and migration
Listed in NCBI GEO
Tetratricopeptide repeat domain 5 (TTC5) mediates the co-translational degradation of tubulin transcripts in response to excess soluble tubulin, a.k.a. “tubulin autoregulation”.
Description
TTC5 mutations associate with cerebral atrophy, speech and motor impairment; however, the role of TTC5 and tubulin autoregulation in neuronal development are unknown. Using a human iPSC-derived cortical-like neuron model, we show that tubulin autoregulation is activated during neuronal differentiation and is TTC5-dependent.
Across differentiation, TTC5 loss suppresses microtubule polymerization and impairs axonal outgrowth and arborization. Moreover, TTC5 loss, or CRISPR knock-in of either an autoregulation-defective point mutant or previously uncharacterized patient disease mutants, unexpectedly stimulate neuronal motility. These phenotypes recapitulate in vivo where TTC5 loss in mouse cerebral cortex projection neurons (CPNs) alters axon arborization and promotes aberrant hypermigration.
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Our work is the first characterization of autoregulation and its mediators in neurons, and the first to reveal the functional impact of TTC5 disease mutations and connect them to clinically relevant phenotypes both in a human and mouse system. This RNA-Seq dataset was part of comprehensively characterizing the transcriptomic response to colchicine treatment in WT and TTC5 knock-down D14 i3Neurons.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE312nnn/GSE312628 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312628 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1375555 ncbi.nlm.nih.gov/bioproject/PRJNA1375555 ↗
project · from NCBI GEO
- PubMed 42465459 pubmed.ncbi.nlm.nih.gov/42465459 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Audio 65% · Biochemistry and cell biology 69% · Disease 75% · RNA sequencing 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE312628 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:audio | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |