Omics · study · 2026
GNAQ p.R183Q endothelial cells fail to align in response to laminar shear stress and exhibit increased expression of MAPK, inflammation, and cell adhesion genes
Listed in NCBI GEO
Vascular malformations, often caused by germline and/or somatic mutations, typically arise from defects in endothelial or perivascular cell behaviors – e.g. localized vessel enlargement.
Description
A key research focus is the influence of shear stress on the development of these malformations, as normal blood flow promotes endothelial stability; consequently, the mutations may disrupt responses to laminar shear stress (LSS), leading to vascular dysfunction and progressive malformation.
In this study, we explore how endothelial cells with the GNAQ p.R183Q somatic mutation found in 90% of syndromic and non-syndromic capillary malformations (CM) respond to increasing levels of LSS. Our findings show that in contrast to control endothelial cells (EC-WT), the mutant endothelial cells (EC-R183Q) fail to align properly under LSS conditions. RNA sequencing revealed altered gene expression in mutant cells exposed to LSS, specifically in pathways related to MAPK, apoptosis, inflammation, and cell adhesion.
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These results suggest impaired mechanosensory responses in GNAQ p.R183Q endothelium that may contribute to vascular dysfunction and in capillary malformations.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306224 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306224 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1309716 ncbi.nlm.nih.gov/bioproject/PRJNA1309716 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306224 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |