Omics · study · 2026
Lung microbiota coordinates alveolar macrophage and γδ T cell activation against Klebsiella pneumoniae via SCFA-FFAR2 axis
Listed in NCBI GEO
Here, we show that intratracheal vancomycin-induced lung dysbiosis renders mice more susceptible to K. pneumoniae and dampens immune responses to LPS, characterized by reduced IL-17A production and impaired activation of IL-17A+ γδ T cells in the lung.
Description
This effect is dependent on decreased IL-1β secretion from alveolar macrophages (AMs), accompanied by restrained NF-κB and GPR signaling. Additionally, lung dysbiosis reduces microbiota-derived SCFAs in the lung, while FFAR2, their major receptor, is predominantly expressed on AMs.
Furthermore, acetate activation of FFAR2 on AMs enhances NF-κB phosphorylation, inflammasome activation, and IL-1β production, promoting IL-17A+ γδ T cell activation. Moreover, acetate supplementation rescued lung dysbiosis-suppressed immune responses and host defense in a FFAR2-dependent manner on AMs. In conclusion, lung microbiota-derived SCFAs coordinate the activation of AMs and γδ T cells through FFAR2, suggesting that lung dysbiosis compromises the protective role of commensal bacteria in modulating innate immune network against K. pneumoniae infections.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE309nnn/GSE309138 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309138 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1334207 ncbi.nlm.nih.gov/bioproject/PRJNA1334207 ↗
project · from NCBI GEO
- PubMed 41993626 pubmed.ncbi.nlm.nih.gov/41993626 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE309138 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |