Omics · study · 2026
A conserved logic for the development of cortical layering in tetrapods [St_30-53]
Listed in NCBI GEO
The evolutionary origin of the cerebral cortex, a brain region classically defined by the presence of neuronal layers, remains elusive.
Description
We find that the salamander dorsal pallium is layered: superficial and deep-layer neurons have distinct birthdates, transcriptomic identities and projections. Using lineage tracing and scRNA-seq, we uncover evolutionarily-conserved principles of cortical development, including temporal patterning in multipotent radial glia progenitors, and the deployment of intermediate progenitor cells.
We also describe the transcriptomic divergence of neuronal differentiation programs across species, suggesting that evolutionary diversification of cortical neuron types stems from changes in gene regulation after cell cycle exit. Our findings challenge long-held assumptions on the development and evolution of the cerebral cortex, and suggest that the mammalian neocortex evolved through modifications of a conserved developmental framework.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE308nnn/GSE308588 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308588 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1331652 ncbi.nlm.nih.gov/bioproject/PRJNA1331652 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Evolution of developmental systems 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE308588 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:field:310404 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |