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Omics · study · 2026

Characterization of tumour microenvironment landscape of mouse oral cancer tumours

Listed in NCBI GEO

Access of CD8+ T cells inside tumour nests is shaped by the tumour microenvironment (TME).

Description

Cancer-associated fibroblasts (CAFs) are among the most abundant TME components and have been associated with poor survival and T cells exclusion. However, the mechanisms that link CAFs presence with T cell blockade are unclear and there is a huge unmet medical need to increase T cell accessibility inside tumour cores.

Here, we established single cell RNAseq of syngeneic murine models of head and neck squamous cell carcinoma that recapitulate different tumour-stroma organizations and evolutions (MOC1 and MOC2). MOC1 tumours are immune indolent and transition from a T cell infiltrated to an immune excluded/desert TME over time. MOC2 are more aggressive and are rich in myeloid cells while being T cell desert.

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From keywords
Life Sciences
Inferred from text
Cancer 75% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE27713513 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[disease].local:disease:cancerenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title