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Table · dataset · 2026

Haplotype-resolved chromosome-level genome assembly and gene annotation of <i>Abies koreana</i>

Listed in HKU DataHub and figshare and Loughborough Research Repository — shown once because both records carry DOI 10.25452/figshare.plus.33274002.v1

<p dir="ltr"><i>Abies koreana </i>E.H,Wilson is an endangered conifer species endemic to the Korean Penisula.

Description

This dataset provides the haplotype-resolved chromosome-level genome assembly and gene annotation of <i>A. koreana</i>. The genome was assembled using PacBio HiFi long-read sequencing and Hi-C chromatin conformation capture data, generating two independently resolved haplotypes, Hap A and Hap B. Gene annotation was performed using transcriptomic evidence, including PacBio Iso-Seq data.

For each haplotype, the dataset includes the chromosome-level genome assembly in FASTA format, gene annotations in GFF format, and predicted protein sequences in FASTA format. These resources provide a reference for genomic, evolutionary, population genetic, and conservation studies of <i>A. koreana </i>and other <i>Abies </i>species.</p>

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Sequencing 75%
Provenance · 3 source records, 34 field assertions
SourceKeyLast seenRaw
HKU DataHuboai:figshare.com:article/3327400211 d agoJSON v1
figshareoai:figshare.com:article/3327400211 d agoJSON v1
Loughborough Research Repositoryoai:figshare.com:article/3327400210 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].anzsrc:field:310509mapping · figshare comvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · repository lboro ac ukvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].anzsrc:field:310509mapping · datahub hku hkvocabulary-mapper@1.0.0keywords['Genomics']
concepts[field].local:field:astronomymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:chemistrymapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:earth-environmentalmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:earth-environmentalmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:economics-financemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:economics-financemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:engineeringmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:engineeringmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:humanitiesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:life-sciencesmapping · datahub hku hkconnector:datahub_hku_hk@1.0.0
concepts[field].local:field:materials-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:mathematics-statisticsmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:medicine-healthmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:ocean-atmosphericmapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:psychology-behavioralmapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[field].local:field:social-sciencemapping · figshare comconnector:figshare_com@1.0.0
concepts[field].local:field:social-sciencemapping · repository lboro ac ukconnector:repository_lboro_ac_uk@1.0.0
concepts[modality].local:modality:sequencingenrichment · datahub hku hkkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · datahub hku hkconnector:datahub_hku_hk@1.0.0/metadata/dc/description
licensesource · datahub hku hkconnector:datahub_hku_hk@1.0.0/metadata/dc/rights
publication_datesource · datahub hku hkconnector:datahub_hku_hk@1.0.0
titlesource · datahub hku hkconnector:datahub_hku_hk@1.0.0/metadata/dc/title