Omics · study · 2026
FOXA1 promotes SCLC chemoresistance [RNA-Seq]
Listed in NCBI GEO
Small cell lung cancer (SCLC) is an aggressive neuroendocrine tumor.
Description
While chemotherapy has been the cornerstone of first-line treatment, most SCLC patients develop chemoresistance shortly after an initial response, and the molecular basis of this resistance remains poorly understood. Here, we identify FOXA1 as a frequently amplified and upregulated gene in SCLC, with high FOXA1 expression correlating with poor outcomes.
We further demonstrate that FOXA1 overexpression promotes resistance to chemotherapy. Mechanistically, we reveal that WNT5A is a downstream target of FOXA1 that mediates chemoresistance through activation of the Wnt/β-catenin pathway. FOXA1 also induces epithelial-mesenchymal transition (EMT) in SCLC cells, and human SCLC tumors with high FOXA1 expression exhibit enriched EMT and Wnt/β-catenin pathway signatures.
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Importantly, pharmacological inhibition of the Wnt pathway selectively suppresses the growth of FOXA1-overexpressing SCLC cells. Collectively, our study identifies FOXA1 as a key driver of chemoresistance in SCLC and highlights Wnt pathway inhibition as a promising strategy to overcome FOXA1-driven chemoresistance.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE313nnn/GSE313395 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313395 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1379439 ncbi.nlm.nih.gov/bioproject/PRJNA1379439 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE313395 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |