Data · dataset · 2025
Smarce1-Differential & enrichment analysis
Listed in Teesside University Research Data Repository
This is an excel table that includes data of differential expression, Gene Ontology analysis and KEGG analysis.
Description
These data was generated from the comparison of mRNA sequences obtained from wild-type and smarce1 mutant dissected retinas. The smarce1 gene encodes a subunit of the BAF chromatin remodeling complex.
We introduced loss-of-function mutations in this gene and characterized the eye phenotype. The excel document contains complete lists of the genes with significant differential expression, the GO groups encompassing these genes, and the gene pathways that are significantly represented according to the KEGGS protocol.
Links
Where it is published
- DOI doi.org/10.17632/fmh7ftw7hk.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Danio rerio · Developmental genetics · Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/fmh7ftw7hk.1 | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:310503 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Developmental Genetics'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:7955 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Danio rerio'] |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |