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Omics · study · 2026

The role of Nuclear factor NF-Y in nutrient-mediated tissue turnover

Listed in NCBI GEO

Cellular turnover is the process of replacing old or damaged cells with new ones in the intestinal epithelium.

Description

The intestinal turnover relies on dietary cues, mediated by nutrient-sensing pathways, to regulate the balance between cell division and cell death. Several signaling pathways, including the target of rapamycin (mTOR), are known to play a role in this process.

However, specific mechanisms of how nutrient-sensing pathways adjust intestinal turnover remain unclear. My unpublished results show that silencing of NF-Y in ISCs disrupts cellular turnover, cell adhesion, and cell communication, leading to excessive cell delamination into the intestinal lumen and the development of dysplastic changes in the intestinal epithelium. mRNA sequencing from ISCs shows that NF-Y regulates several genes related to the activity of the nutrient-sensing mTOR pathway.

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As a result, silencing NF-Y in ISCs leads to the activation of the mTOR pathway and the emergence of enlarged immature cells. Inhibition of the mTOR pathway genetically, through calorie restriction or through rapamycin feeding, prevents the NF-Y phenotype. These data show that NF-Y is a novel regulator of intestinal turnover in response to nutrients.

The results from this project can enhance our understanding of how nutrient-sensing pathways are regulated in pathologies related to epithelial turnover.

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Life Sciences
Inferred from text
Genetics 70% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE31761710 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].anzsrc:group:3105enrichment · NCBI GEOtaxonomy-embedding@1.1.0title+keywords+description (70%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:7227source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title