Data · dataset · 2015
The Spatial LASSO With Applications to Unmixing Hyperspectral Biomedical Images
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Hyperspectral imaging (HSI) is a spectroscopic method that uses densely sampled measurements along the electromagnetic spectrum to identify the unique molecular composition of an object.
Description
Traditionally HSI has been associated with remote sensing-type applications, but recently has found increased use in biomedicine, from investigations at the cellular to the tissue level. One of the main challenges in the analysis of HSI is estimating the proportions, also called abundance fractions of each of the molecular signatures.
While there is great promise for HSI in the area of biomedicine, large variability in the measurements and artifacts related to the instrumentation has slow adoption into more widespread practice. In this article, we propose a novel regularization and variable selection method called the spatial LASSO (SPLASSO). The SPLASSO incorporates spatial information via a graph Laplacian-based penalty to help improve the model estimation process for multivariate response data.
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We show the strong performance of this approach on a benchmark HSI dataset with considerable improvement in predictive accuracy over the standard LASSO. Supplementary materials for this article are available online.
Links
Where it is published
- Repository landing page tandf.figshare.com/articles/dataset/The_Spatial_LASSO_With_Applications_to_Unmixi… ↗
landing page · from DataCite
- Repository landing page tandf.figshare.com/articles/dataset/The_Spatial_LASSO_With_Applications_to_Unmixi… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1230086 ↗
DOI / persistent id · from DataCite
- DOI doi.org/10.6084/m9.figshare.1230086.v2 ↗
DOI / persistent id · from DataCite
Documentation and papers
- Creative Commons Attribution 4.0 International creativecommons.org/licenses/by/4.0/legalcode ↗
license · from DataCite
- IsSupplementTo 10.1080/00401706.2014.979950 doi.org/10.1080/00401706.2014.979950 ↗
publication · from DataCite
Catalogue records · 4
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1230086.v2 ↗
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- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1230086 ↗
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- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1230086.v2 ↗
catalogue entry · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1230086 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Mathematics · Mathematics
- From keywords
- Chemistry · Chemistry · Engineering · Engineering · Life Sciences · Life Sciences · Mathematics & Statistics · Mathematics & Statistics
- Inferred from text
- Biomedical engineering 71% · Image 65% · Imaging 75%
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- Inverse of has versionThe Spatial LASSO with Applications to Unmixing Hyperspectral Biomedical Images
- Possibly the same asThe Spatial LASSO with Applications to Unmixing Hyperspectral Biomedical Images
Provenance · 2 source records, 21 field assertions
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| DataCite | 10.6084/m9.figshare.1230086 | 14 d ago | JSON v1 |
| DataCite | 10.6084/m9.figshare.1230086.v2 | 14 d ago | JSON v1 |
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