Data · dataset · 2015
The Spatial LASSO with Applications to Unmixing Hyperspectral Biomedical Images
Listed in DataCite
Hyperspectral imaging (HSI) is a spectroscopic method which uses densely sampled measurements along the electromagnetic spectrum to identify the unique molecular composition of an object.
Description
Traditionally HSI has been associated with remote sensing type applications, but recently has found increased use in biomedicine, from investigations at the cellular to the tissue level. One of the main challenges in the analysis of HSI is estimating the proportions, also called abundance fractions of each of the molecular signatures.
While there is great promise for HSI in the area of biomedicine, large variability in the measurements and artifacts related to the instrumentation have slown adoption into more widespread practice. In this paper we propose a novel regularization and variable selection method called the spatial LASSO (SPLASSO). The SPLASSO incorporates spatial information via a graph Laplacian based penalty to help improve the model estimation process for multivariate response data.
Read the rest (1 more)
We show the strong performance of this approach on a benchmark HSI data set with considerable improvement in predictive accuracy over the standard LASSO.
Links
Where it is published
- Repository landing page tandf.figshare.com/articles/dataset/The_Spatial_LASSO_with_Applications_to_Unmixi… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1230086.v1 ↗
DOI / persistent id · from DataCite
Documentation and papers
- Creative Commons Attribution 4.0 International creativecommons.org/licenses/by/4.0/legalcode ↗
license · from DataCite
- IsSupplementTo 10.1080/00401706.2014.979950 doi.org/10.1080/00401706.2014.979950 ↗
publication · from DataCite
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1230086.v1 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1230086.v1 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Mathematics
- From keywords
- Chemistry · Engineering · Life Sciences · Mathematics & Statistics
- Inferred from text
- Biomedical engineering 71% · Image 65% · Imaging 75% · Satellite remote sensing 65%
Related
Provenance · 1 source records, 17 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1230086.v1 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].anzsrc:group:4003 | enrichment · DataCite | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].fos:mathematics | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Chemistry'] |
| concepts[field].local:field:engineering | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Engineering'] |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| concepts[field].local:field:mathematics-statistics | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Mathematics'] |
| concepts[modality].local:modality:image | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:imaging | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:remote-sensing | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |