Omics · study · 2026
Epigenetic Dysregulation in Keloid Pathogenesis: Genome-wide Identification and Validation of Novel Methylation Signatures
Listed in NCBI GEO
Keloid scars are related to genetic factors and some environmental factors.
Description
Currently, most molecular studies on keloids have primarily focused on epigenetic mechanisms, involving gene expression regulation mechanisms, particularly DNA methylation, where methylation changes have been reported to cause many complex diseases. These studies investigate DNA methylation changes that have been linked to keloid scars.
This study aimed to enhance our understanding of keloid scars by examining the epigenetic mechanisms involved from 12 keloid scar fibroblasts and 6 normal skin fibroblasts, using the Infinium MethylationEPIC BeadChip (Illumina, San Diego, CA, USA). The findings revealed 3,564 differentially methylated CpG sites, 828 were hypomethylated (TSS200: 17.11%, TSS1500:37.76%, body: 44.84%, 3'UTR: 0.29%), and 2,736 were hypermethylated (TSS200: 14.81%, TSS1500: 37.34%, body: 47.50%, 3'UTR: 0.18%).
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This study may serve as a guideline for managing patients with keloid scars in the future.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE287nnn/GSE287965 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE287965 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1215374 ncbi.nlm.nih.gov/bioproject/PRJNA1215374 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Methylation profiling by genome tiling array
- From keywords
- Life Sciences
- Inferred from text
- Genetics 73%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE287965 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (73%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:methylation-profiling-by-genome-tiling-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |