Omics · study · 2026
CREST functions as a molecular bridge between neuron-specific enhancers and epigenetic regulators in mature motor neurons
Listed in NCBI GEO
Neuronal cell identity is partially established by epigenetic regulatory proteins, including chromatin remodeling complexes, which use their ATPase to modulate the accessibility of cis-regulatory DNA elements such as enhancers.
Description
Neuron-specific BAF (Brg1/Brm-associated factor) chromatin remodeling complexes contain a non-catalytic subunit, CREST, whose de novo mutations have been identified in motor neuron disease patients.
However, the mechanisms by which CREST regulates neuronal gene expression programs during motor neuron differentiation remain unclear. Here, we elucidate the genome-wide mechanisms by which CREST regulates motor neuron differentiation from mouse embryonic stem cells. We found that CREST recognizes enhancers bound by motor neuron-specific transcription factors Onecut1 and Ngn2.
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Then, CREST selectively recruits the CBP histone acetyltransferase to acetylate histone H3 lysine 27 at neuronal enhancers, leading to the epigenetic activation of mature neuronal genes through long-range chromatin interactions. We also show that CREST-bound enhancers gain accessibility through selective recruitment of the neuron-specific Brm ATPase during the transition from neural progenitors to mature motor neurons.
Furthermore, CREST knockout disrupts the expression of other subunits of neuronal BAF chromatin remodeling complexes, suggesting that CREST may influence the assembly of these complexes. Our findings reveal a non-canonical role of neuron-specific chromatin remodeling factors, demonstrating that CREST mediates communication between epigenetic regulators and neuron-specific enhancers, which are essential for proper neuronal function.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE326nnn/GSE326223 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326223 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1444169 ncbi.nlm.nih.gov/bioproject/PRJNA1444169 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE326223 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |