Omics · study · 2026
A 24-hour light-dark time-series bulk RNA-seq dataset of the mouse lacrimal gland
Listed in NCBI GEO
The lacrimal gland is a major exocrine organ responsible for tear secretion and is essential for maintaining ocular surface homeostasis.
Description
However, time-resolved transcriptomic resources for this tissue remain limited. Here, we generated a bulk RNA-seq time-series dataset from extraorbital lacrimal glands of male C57BL/6J mice maintained under a controlled 12:12 light-dark schedule.
Tissue samples were collected at 3-h intervals across a 24-h cycle, yielding eight time points with three biological replicates per time point. Libraries were prepared from total RNA and sequenced as 150-bp paired-end reads. This dataset provides a reusable temporal transcriptomic resource for downstream studies of lacrimal gland biology, ocular surface physiology, and gene-expression dynamics under defined light-dark conditions.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE333nnn/GSE333177 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333177 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1309031 ncbi.nlm.nih.gov/bioproject/PRJNA1309031 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65% · Zoology 69%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE333177 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3109 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |