Omics · study · 2026
Gene expression profiles in peripheral blood mononuclear cells of patients with pulmonary tuberculosis and lung cancer
Listed in NCBI GEO
Lung cancer and pulmonary tuberculosis (PTB) are two common lung diseases with similar symptom, and pre-existing PTB poses an increased lung cancer risk, yet the detailed molecular mechanism is still not clear.
Description
The objective of this study was to identify differentially expressed genes (DEGs) in peripheral blood mononuclear cells (PBMCs) of PTB patients, lung adenocarcinoma (LUAD) patients, and lung squamous cell carcinoma (LUSC) patients providing a basis for further screening of diagnostic and differential diagnostic biomarkers for cancer and PTB, and exploring the potential mechanisms by which PTB patients increase the risk of lung cancer.
Expression profiles of lncRNAs and mRNAs in PBMCs from PTB, LUAD, and LUSC patients were characterized by microarray assay and six DEGs were selected for validation using reverse transcription real-time quantitative polymerase chain reaction (RT-qPCR). Gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway based approaches were used to investigate potential biological functions and pathways signaling pathways enriched by the DEGs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE267nnn/GSE267948 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE267948 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1113688 ncbi.nlm.nih.gov/bioproject/PRJNA1113688 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Non-coding RNA profiling by array
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE267948 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |