Excel · study · 2026
Synthesis and Mechanistic Dissection of Biselyngbyaside Induced Cytotoxicity through Multi-omics Profiling
Listed in NCBI GEO
Deciphering the mechanism of action of natural products remains great challenges.
Description
Biselyngbyasides (BILs), a class of marine 18-membered macrolides, display strong cytotoxicity in various cancer cells, whereas, their molecular mechanisms remain poorly understood. Here, we establish a multi-omics strategy integrating chemotranscriptomics, phosphoproteomics and peptide-centric local stability assays (PELSA) to systematically characterize cellular responses triggered by biselyngbyolide A (BILA).
Multi-omics data analysis demonstrates that BILA triggered a signaling cascade including ER stress, UPR activation, lipid metabolism remodeling, cell-cycle arrest, and apoptosis by inhibition of SERCA. Using synthetic BILA and its aza-analogue, we performed structure-function analysis and further pinpoint the core pharmacophore responsible for cytotoxicity. This study clarifies the full signaling network regulated by BILA and provides a versatile analytical tools for mechanistic investigation of complex natural products in early drug discovery.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE342nnn/GSE342138 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342138 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1505656 ncbi.nlm.nih.gov/bioproject/PRJNA1505656 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69% · Cancer 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE342138 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |