Excel · study · 2026
MicroRNA profiling in serum reveals host-virus interactions associated with Epstein-Barr virus in persons with multiple sclerosis
Listed in NCBI GEO
This study investigated viral- and host-encoded miRNAs in serum from persons with (PwMS) or without (PwoMS) MS with the goal of identifying miRNAs associated with MS phenotypes and responses to therapy.
Description
PwMS were stratified by Low- and High-EDSS and compared to PwoMS in Discovery (DC) and Validation (VC) Cohorts. miRNAs were measured by sequencing in the DC that were verified by droplet digital PCR (ddPCR) in the VC. Multiple machine learning algorithms were applied to each dataset.
Here, hsa-miR-26b-5p was suppressed in High-EDSS PwMS while hsa-miR-181d-5p was suppressed in the Low-EDSS PwMS, compared to PwoMS. ebv-miR-BART11-5p, identified in the DC by sequencing, was increased in Low-EDSS versus High-EDSS PwMS in the VC. In conclusion, this study identified previously unrecognized miRNAs, hsa-miR-181d-5p, hsa-miR-26b-5p, and ebv-miR-BART11-5p, associated with disease severity in PwMS.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE347nnn/GSE347948 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347948 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1531666 ncbi.nlm.nih.gov/bioproject/PRJNA1531666 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE347948 | 7 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |