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Excel · study · 2026

Transcriptome alterations induced by acute and persistent human bocavirus 1 infection in human airway epithelial cells

Listed in NCBI GEO

Human bocavirus 1 (HBoV1) is a common cause of respiratory tract infection in children.

Description

It replicates efficiently in human airway epithelial (HAE) cells and is shed into the airways for months after acute infection. It further persists in B cells of tonsillar germinal centers with unknown consequences.

Our aim was to compare how acute and persistent virus infections influence the cells. We performed total RNA sequencing to investigate the cellular transcriptomes of polarized HAE cells infected with HBoV1 at 7, 14 and 30 days post infection, and compared the biological pathways enriched across these different time points. We observed significant activation in the interferon signaling pathway and elevation of pattern recognition receptors, including toll-like receptor 2, only in the acute phase, whereas a slight elevation of the p53-signalling pathway was still observed after 30 days.

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The results indicate that the cells seem to reach an equilibrium state with the virus where viral activity and cellular impact are balanced.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32640410 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title