Omics · study · 2026
Single-nucleus transcriptomic analysis of aging and hepatocyte-specific ADK reduction in mouse liver
Listed in NCBI GEO
Aging is associated with extensive transcriptional and cellular changes in the liver, including the emergence of metabolically dysfunctional and stress-responsive hepatocyte states.
Description
Adenosine kinase (ADK) is a key regulator of intracellular and extracellular adenosine homeostasis; however, its contribution to age-associated liver remodeling remains incompletely understood. To characterize liver aging at single-nucleus resolution and investigate the role of hepatocyte ADK, we performed single-nucleus RNA sequencing of liver tissues from 3-month-old wild-type mice, 18-month-old wild-type mice, and 18-month-old mice carrying hepatocyte-specific ADK wild-type or heterozygous alleles.
Comparative transcriptomic analyses were used to identify age-associated changes in hepatic cell populations, characterize distinct hepatocyte states, and determine how partial reduction of hepatocyte ADK influences aging-related transcriptional programs. This dataset provides a resource for investigating cellular heterogeneity, hepatocyte aging, and ADK-dependent regulation in the aged mouse liver.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE341nnn/GSE341377 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341377 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1501453 ncbi.nlm.nih.gov/bioproject/PRJNA1501453 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE341377 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |