Omics · study · 2026
KSR2 is novel candidate oncogene in TAL1-positive T-cell acute lymphoblastic leukemia with potential clinical implications
Listed in NCBI GEO
T-cell acute lymphoblastic leukemia (T-ALL) is a rare hematological malignancy characterized by substantial molecular heterogeneity and aggressiveness manifested by relatively high incidence of relapse and drug resistance.
Description
Despite the growing understanding of T-ALL biology and increasing cure rate of this disease, novel oncogenes with biomarker and therapeutic potential are needed to recognize high-risk patients and improve therapy effectiveness.
Here we demonstrate that KSR2 is overexpressed in a subgroup of T-ALL patients and that its expression is linked to TAL1 genetic subtype of this malignancy. We show that the ectopic expression of KSR2 results from demethylation of its regulatory region followed by direct binding of TAL1 transcription factor. We demonstrate that the expression of KSR2 is a potential marker of worse outcome within the TAL1 subtype of T-ALL.
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We show that KSR2 provides growth advantage in T-ALL in vitro pointing to its oncogenic activity. We demonstrate a dose-dependent cytotoxic effect of APS-2-79, a small molecule inhibitor of KSR2 protein, in T-ALL cell lines expressing KSR2. Finally, we show that KSR2 is involved in metabolic processes, such as glycolysis and biosynthesis of lipids and proteins and that this effect is mediated by supporting AMPK signaling.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE286nnn/GSE286430 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286430 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1209123 ncbi.nlm.nih.gov/bioproject/PRJNA1209123 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE286430 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |