Omics · study · 2026
Transcriptional and Notch signaling dynamics of early inner ear development
Listed in NCBI GEO
We utilized FACS to sort EpCAM positive cells of the developing inner ear, known as the otocyst.
Description
We performed this collection method for a variety of ages of Wildtype (ICR background) samples, as well as collection of the Notch activated otocyst, utilizing a cross between Pax2-Cre and RosaNotch mouse lines. We utilized these scRNAseq datasets to examine novel markers of the developing otocyst, annotate known regions of the developing otocyst, and understand more about the signaling mechanism in the wild type and notch activated samples.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE297nnn/GSE297219 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297219 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1263196 ncbi.nlm.nih.gov/bioproject/PRJNA1263196 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE297219 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |