Data · dataset · 2026
<p>scRNA-seq reveals subcellular distribution of mRNAs.</p>
Listed in ZivaHub
Description
<p><b>(A)</b> UMAP representing the L3 glial clusters annotated accordingly to cluster numbers prior to annotation (<a href="plosbiology.org/article/info:doi/10.1371/journal.pbio.3004015#pbio.3004015.g002" target="_blank">Fig 2B</a> and <a href="plosbiology.org/article/info:doi/10.1371/journal.pbio.3004015#pbio.3004015.s009" target="_blank">S1 Table</a>). Chiasm glia clusters are highlighted in blue are cortex glia clusters in pink.
PC = Cellular Processes, CB = Cell Body. <b>(B)</b> Heatmap representing the top markers for each cluster (high expression in yellow, and low expression in purple). The chiasm glia cluster 12 and 4 are highly similar, sharing the same markers, as is the case for the cortex glia clusters 20, 7, 1, and 3. <b>(C, D)</b> Dissociated cells from L3 optic lobe expressing membrane-bound GFP in chiasm glia. Hoechst labels cellular nuclei.
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Chiasm glia with nucleus (C) and Chiasm glia fragments without nucleus (D). Scale bar = 20 µm. The code used to generate the graphs can be found at <a href="zenodo.org/records/21890456" target="_blank">zenodo.org/records/21890456</a>.</p> <p>(TIFF)</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.pbio.3004015.s005 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Biochemistry and cell biology · Cancer · Earth & Environmental Science · Genetics · Life Sciences · Medicine & Health · Plant biology
- Inferred from text
- Single-cell RNA sequencing 65% · Tabular 65%
Provenance · 1 source records, 14 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34017631 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:group:3101 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3105 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].anzsrc:group:3108 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Plant Biology'] |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:tabular | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |