Excel · study · 2026
Assessment of the association of periodontitis and diabetes mellitus with Alzheimer's disease in a mouse model [RNA-seq]
Listed in NCBI GEO
The purpose of this study was to investigate the association of periodontitis and diabetes mellitus (DM) with Alzheimer’s disease (AD)-related changes through microRNA (miRNA) using AD model mice.
Description
Twenty-four male knock-in mice (B6-AppNL-G-F/NL-G-F/J) were divided into four groups: control (C), DM, periodontitis (P), and DM plus periodontitis (DM+P). After an 8-week experimental period, memory performance was assessed using the Y-maze test, and brain samples were analyzed by next-generation sequencing. miRNA and mRNA expression profiles were evaluated by comparing the DM+P and C groups, and integrated miRNA–mRNA analysis was performed to identify candidate regulatory relationships.
Neurod1 protein expression in the hippocampus was also assessed. The DM+P group showed significantly lower memory performance than the C group. Integrated analysis identified seven candidate miRNA–mRNA pairs, among which Neurod1 showed the greatest decrease in mRNA expression and was predicted to be regulated by miR-693-3p.
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Neurod1 protein expression in the hippocampus was significantly lower in the DM+P group than in the C group. These findings suggest that combined exposure to periodontitis and DM was associated with AD-like pathological changes and alterations in miRNA–mRNA regulatory relationships, with the miR-693-3p/Neurod1 pair identified as a candidate regulatory axis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE344nnn/GSE344050 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344050 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1514155 ncbi.nlm.nih.gov/bioproject/PRJNA1514155 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE344050 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |