Data · dataset · 2014
VCF file of Variants in a wide onion cross segregating for bolting
Listed in Zenodo
Description
VCF (variant call format) file of variants from bulked segregant RNA PoolSeq (BSR-seq) of F2 progeny pools of a wide onion cross segregating for bolting (precocious flowering). The reference assembly is GBGJ00000000.1 ncbi.nlm.nih.gov/nuccore/656904698 The pools were taken from materials sampled for validation of the AcBlt1 locus as described in ncbi.nlm.nih.gov/pubmed/24247236 Pools were from bolting or non-bolting plants homozygous at the most closely linked marker to AcBlt1 either for the bolt-associated genotype (AA) or the non-bolt genotype (BB).
Links
Get the data
- BSA_pools_TSA.vcf.gz zenodo.org/api/records/11455/files/BSA_pools_TSA.vcf.gz/content ↗
download · from Zenodo
Where it is published
- Zenodo record zenodo.org/records/11455 ↗
landing page · from Zenodo
- DOI doi.org/10.5281/zenodo.11455 ↗
DOI / persistent id · from Zenodo
Catalogue records · 1
- Zenodo API zenodo.org/api/records/11455 ↗
metadata API · from Zenodo
Topics
- From keywords
- Genomics
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Zenodo | 11455 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Zenodo | connector:zenodo@1.0.0 | /metadata/access_right |
| byte_size | source · Zenodo | connector:zenodo@1.0.0 | |
| created_date | source · Zenodo | connector:zenodo@1.0.0 | |
| description | source · Zenodo | connector:zenodo@1.0.0 | /metadata/description |
| license_text | source · Zenodo | connector:zenodo@1.0.0 | |
| publication_date | source · Zenodo | connector:zenodo@1.0.0 | |
| title | source · Zenodo | connector:zenodo@1.0.0 | /metadata/title |
| updated_date | source · Zenodo | connector:zenodo@1.0.0 |